SNP Report
Name | rs4672441   dbSNP |
---|---|
Location | chr:2,61638952 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10169662 | 0.85[CHB][hapmap];0.88[CHD][hapmap];0.89[JPT][hapmap] |
rs10865324 | 0.87[ASN][1000 genomes] |
rs11125883 | 0.96[CEU][hapmap];0.90[CHB][hapmap] |
rs11677775 | 0.90[JPT][hapmap] |
rs11677776 | 0.93[JPT][hapmap] |
rs11692449 | 0.81[EUR][1000 genomes] |
rs13028833 | 0.89[ASN][1000 genomes] |
rs2084318 | 1.00[CHB][hapmap];0.90[JPT][hapmap];0.88[ASN][1000 genomes] |
rs2123112 | 0.84[JPT][hapmap] |
rs2421196 | 0.82[ASN][1000 genomes] |
rs2442025 | 0.83[ASN][1000 genomes] |
rs2442037 | 0.84[ASN][1000 genomes] |
rs2922089 | 0.87[ASN][1000 genomes] |
rs3213951 | 0.83[CEU][hapmap];0.94[JPT][hapmap];0.86[MKK][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs34668697 | 0.83[ASN][1000 genomes] |
rs4671403 | 0.90[JPT][hapmap] |
rs4672424 | 0.83[JPT][hapmap] |
rs4672427 | 0.80[CHB][hapmap];0.83[CHD][hapmap];0.89[JPT][hapmap] |
rs4672440 | 1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6545846 | 0.89[JPT][hapmap] |
rs6545855 | 0.85[CHB][hapmap];0.90[JPT][hapmap] |
rs6545868 | 0.82[JPT][hapmap] |
rs6708277 | 0.87[ASN][1000 genomes] |
rs6737373 | 0.83[CHD][hapmap];0.90[JPT][hapmap] |
rs74181273 | 0.80[EUR][1000 genomes] |
rs7583383 | 0.89[JPT][hapmap] |
rs7587389 | 0.88[ASN][1000 genomes] |
rs778138 | 0.92[EUR][1000 genomes] |
rs778153 | 0.90[CHB][hapmap];0.90[JPT][hapmap];0.83[ASN][1000 genomes] |
rs811871 | 0.95[CHB][hapmap];0.90[JPT][hapmap];0.83[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
USP34 | Distal transcriptional regulation |
USP34 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014