SNP Report
Name | rs1186696   dbSNP |
---|---|
Location | chr:2,61660483 |
Allele | A/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10865324 | 0.89[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs12616433 | 0.80[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs13028833 | 0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs1867838 | 0.88[EUR][1000 genomes] |
rs2084318 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs2421196 | 0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs2421200 | 0.82[EUR][1000 genomes] |
rs2442025 | 0.83[EUR][1000 genomes] |
rs2442037 | 0.85[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs2694627 | 0.87[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs2922089 | 0.89[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs34668697 | 0.82[EUR][1000 genomes] |
rs6545868 | 0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes] |
rs6708277 | 0.87[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs7584500 | 0.90[EUR][1000 genomes] |
rs7587389 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes] |
rs778138 | 0.82[ASN][1000 genomes] |
rs778139 | 0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs778150 | 0.83[AMR][1000 genomes];0.83[EUR][1000 genomes] |
rs778153 | 0.89[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs811871 | 0.82[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
USP34 | Distal transcriptional regulation |
XPO1 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014