SNP Report
Name | rs12616433   dbSNP |
---|---|
Location | chr:2,61696488 |
Allele | G/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10865324 | 0.89[EUR][1000 genomes] |
rs1186696 | 0.80[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs13028833 | 0.91[EUR][1000 genomes] |
rs1867838 | 0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs2084318 | 0.80[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs2421196 | 0.85[EUR][1000 genomes] |
rs2421200 | 0.92[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs2442037 | 0.86[EUR][1000 genomes] |
rs2694627 | 0.85[EUR][1000 genomes] |
rs2922089 | 0.90[EUR][1000 genomes] |
rs6545868 | 0.87[EUR][1000 genomes] |
rs6708277 | 0.90[EUR][1000 genomes] |
rs7584500 | 0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs7587389 | 0.80[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs778139 | 0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes] |
rs778153 | 0.87[EUR][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000234624 | Distal transcriptional regulation |
SNORA70B | Distal transcriptional regulation |
XPO1 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014