SNP Report

Basic Infomation

Name	rs4671397 dbSNP
Location	chr:2,61435847
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10169662	0.84[JPT][hapmap]
rs11677775	0.84[JPT][hapmap]
rs11677776	0.93[JPT][hapmap]
rs1177303	0.83[CHB][hapmap]
rs12473277	0.89[CHB][hapmap];1.00[YRI][hapmap]
rs1665259	0.84[CHB][hapmap]
rs1665260	0.83[CHB][hapmap]
rs1729653	0.83[CHB][hapmap]
rs1729660	0.84[CHB][hapmap];0.82[CHD][hapmap]
rs1729671	0.87[CHB][hapmap]
rs1729672	0.84[CHB][hapmap]
rs1729673	0.84[CHB][hapmap]
rs2123112	0.82[CHD][hapmap];0.80[ASN][1000 genomes]
rs2167564	0.84[CHB][hapmap]
rs2592493	0.83[CHB][hapmap]
rs2600667	0.85[ASN][1000 genomes]
rs2600668	0.84[CHB][hapmap]
rs3213951	0.89[JPT][hapmap]
rs4671403	0.84[JPT][hapmap]
rs4672427	0.84[JPT][hapmap]
rs4672440	0.89[JPT][hapmap]
rs6545846	0.83[JPT][hapmap];0.82[ASN][1000 genomes]
rs6545855	0.84[JPT][hapmap]
rs6737373	0.84[JPT][hapmap]
rs720201	0.83[CHB][hapmap]
rs7583383	0.89[JPT][hapmap]
rs777584	0.82[CHB][hapmap];0.81[CHD][hapmap]
rs777587	0.84[JPT][hapmap]
rs777592	0.89[JPT][hapmap]
rs778153	0.84[JPT][hapmap]
rs811871	0.84[JPT][hapmap]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 7)