SNP Report
Name | rs17458974   dbSNP |
---|---|
Location | chr:12,40558264 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10747959 | 1.00[ASN][1000 genomes] |
rs10878226 | 0.83[YRI][hapmap] |
rs10878246 | 1.00[YRI][hapmap] |
rs11175620 | 0.83[YRI][hapmap] |
rs11175645 | 0.83[YRI][hapmap] |
rs11175655 | 1.00[YRI][hapmap] |
rs11175658 | 0.83[YRI][hapmap] |
rs11175666 | 0.83[YRI][hapmap] |
rs11564113 | 1.00[JPT][hapmap] |
rs11564120 | 1.00[ASN][1000 genomes] |
rs11564122 | 1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11564226 | 1.00[ASN][1000 genomes] |
rs12099949 | 1.00[CEU][hapmap];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1497048 | 1.00[ASN][1000 genomes] |
rs1566127 | 1.00[ASN][1000 genomes] |
rs17442095 | 1.00[JPT][hapmap] |
rs17442346 | 1.00[JPT][hapmap] |
rs17442353 | 1.00[JPT][hapmap] |
rs17442490 | 1.00[JPT][hapmap] |
rs17442665 | 0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17442853 | 1.00[YRI][hapmap] |
rs17442882 | 1.00[JPT][hapmap] |
rs17443421 | 1.00[JPT][hapmap] |
rs17443552 | 1.00[JPT][hapmap] |
rs17444103 | 1.00[JPT][hapmap] |
rs17458257 | 1.00[JPT][hapmap] |
rs17458341 | 1.00[ASN][1000 genomes] |
rs17458745 | 1.00[JPT][hapmap] |
rs17458773 | 1.00[JPT][hapmap] |
rs17458780 | 0.85[CEU][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17458836 | 1.00[CEU][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17460894 | 1.00[JPT][hapmap] |
rs17460992 | 1.00[JPT][hapmap] |
rs17465716 | 1.00[JPT][hapmap] |
rs17465849 | 1.00[JPT][hapmap] |
rs17465891 | 1.00[JPT][hapmap] |
rs17466030 | 1.00[JPT][hapmap] |
rs17466220 | 1.00[JPT][hapmap] |
rs17466269 | 1.00[JPT][hapmap] |
rs17466297 | 1.00[JPT][hapmap] |
rs17466339 | 1.00[JPT][hapmap] |
rs17466451 | 1.00[JPT][hapmap] |
rs17483502 | 1.00[JPT][hapmap] |
rs17489459 | 1.00[JPT][hapmap] |
rs17489480 | 1.00[JPT][hapmap] |
rs17489666 | 1.00[JPT][hapmap] |
rs17489985 | 0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs17490013 | 1.00[JPT][hapmap] |
rs17490578 | 1.00[JPT][hapmap] |
rs17490620 | 1.00[JPT][hapmap] |
rs17490762 | 1.00[JPT][hapmap] |
rs17491110 | 1.00[JPT][hapmap] |
rs17491410 | 1.00[JPT][hapmap] |
rs17518014 | 1.00[JPT][hapmap] |
rs17518050 | 1.00[JPT][hapmap] |
rs17518183 | 1.00[JPT][hapmap] |
rs17518427 | 1.00[JPT][hapmap] |
rs17518441 | 1.00[JPT][hapmap] |
rs17518476 | 1.00[JPT][hapmap] |
rs17518672 | 1.00[JPT][hapmap] |
rs17518735 | 1.00[JPT][hapmap] |
rs17519573 | 0.83[YRI][hapmap] |
rs17519797 | 1.00[JPT][hapmap] |
rs2132745 | 1.00[ASN][1000 genomes] |
rs2132746 | 1.00[ASN][1000 genomes] |
rs2404351 | 1.00[ASN][1000 genomes] |
rs28365202 | 1.00[JPT][hapmap] |
rs28370599 | 1.00[ASN][1000 genomes] |
rs28370641 | 1.00[JPT][hapmap] |
rs28370650 | 1.00[JPT][hapmap] |
rs28370657 | 1.00[JPT][hapmap] |
rs28370706 | 1.00[JPT][hapmap] |
rs28370720 | 1.00[JPT][hapmap] |
rs28370728 | 1.00[JPT][hapmap] |
rs28370730 | 1.00[JPT][hapmap] |
rs28370743 | 1.00[JPT][hapmap] |
rs28370759 | 1.00[JPT][hapmap] |
rs28370766 | 1.00[JPT][hapmap] |
rs28370770 | 1.00[JPT][hapmap] |
rs28370777 | 1.00[JPT][hapmap] |
rs28370778 | 1.00[JPT][hapmap] |
rs28370782 | 1.00[JPT][hapmap] |
rs28370784 | 1.00[JPT][hapmap] |
rs28370786 | 1.00[JPT][hapmap] |
rs28370792 | 1.00[JPT][hapmap] |
rs28370811 | 1.00[JPT][hapmap] |
rs28370825 | 1.00[JPT][hapmap] |
rs2952711 | 0.93[EUR][1000 genomes] |
rs35985096 | 1.00[ASN][1000 genomes] |
rs4768202 | 1.00[ASN][1000 genomes] |
rs7135678 | 1.00[CEU][hapmap];0.83[YRI][hapmap];0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7138078 | 1.00[ASN][1000 genomes] |
rs7294619 | 0.82[YRI][hapmap] |
rs7305155 | 1.00[CEU][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs74088117 | 1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000223914 | Proximal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014