SNP Report
Name | rs11175655   dbSNP |
---|---|
Location | chr:12,40623727 |
Allele | G/A |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10506153 | 0.84[GIH][hapmap] |
rs10878226 | 1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs10878244 | 0.81[GIH][hapmap] |
rs10878246 | 0.82[GIH][hapmap];1.00[YRI][hapmap] |
rs11175620 | 1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11175645 | 1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11175658 | 1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11175666 | 1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11564122 | 1.00[ASW][hapmap];1.00[YRI][hapmap] |
rs11564177 | 0.84[GIH][hapmap] |
rs11564203 | 0.84[GIH][hapmap] |
rs11564205 | 0.84[GIH][hapmap] |
rs11829088 | 0.84[GIH][hapmap] |
rs17442853 | 1.00[YRI][hapmap] |
rs17458836 | 1.00[YRI][hapmap] |
rs17458974 | 1.00[YRI][hapmap] |
rs17519573 | 1.00[YRI][hapmap] |
rs1907632 | 0.88[GIH][hapmap] |
rs7135678 | 0.88[YRI][hapmap] |
rs7294619 | 1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7305155 | 1.00[YRI][hapmap] |
Symbol | Regulation type |
---|---|
LRRK2 | Distal transcriptional regulation |
LRRK2 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014