SNP Report

Basic Infomation

Name	rs17491110 dbSNP
Location	chr:12,40700096
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 52)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11564113	1.00[JPT][hapmap]
rs11613829	1.00[JPT][hapmap]
rs17442882	1.00[JPT][hapmap]
rs17443421	1.00[JPT][hapmap]
rs17443552	1.00[JPT][hapmap]
rs17444103	1.00[JPT][hapmap]
rs17444542	1.00[JPT][hapmap]
rs17458745	1.00[JPT][hapmap]
rs17458773	1.00[JPT][hapmap]
rs17458974	1.00[JPT][hapmap]
rs17465716	1.00[JPT][hapmap]
rs17465849	1.00[JPT][hapmap]
rs17465891	1.00[JPT][hapmap]
rs17466030	1.00[JPT][hapmap]
rs17466220	1.00[JPT][hapmap]
rs17466269	1.00[JPT][hapmap]
rs17466297	1.00[JPT][hapmap]
rs17466339	1.00[JPT][hapmap]
rs17466451	1.00[JPT][hapmap]
rs17466633	1.00[JPT][hapmap]
rs17489666	1.00[JPT][hapmap]
rs17490013	1.00[JPT][hapmap]
rs17490578	1.00[JPT][hapmap]
rs17490620	1.00[JPT][hapmap]
rs17490762	1.00[JPT][hapmap]
rs17490935	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17491013	1.00[AMR][1000 genomes]
rs17491075	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17491180	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17491368	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17491375	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17491410	1.00[JPT][hapmap]
rs17491431	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17491445	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17491638	1.00[AMR][1000 genomes]
rs17491645	1.00[AMR][1000 genomes]
rs17492138	1.00[JPT][hapmap]
rs17518672	1.00[JPT][hapmap]
rs17518735	1.00[JPT][hapmap]
rs17519797	1.00[JPT][hapmap]
rs17519888	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17519964	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17519971	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17520006	0.93[AFR][1000 genomes]
rs17520264	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17520355	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17520376	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17520515	1.00[AMR][1000 genomes]
rs17520634	1.00[JPT][hapmap]
rs17520655	1.00[JPT][hapmap]
rs28365202	1.00[JPT][hapmap]
rs28365243	1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
LRRK2	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)