SNP Report
Basic Infomation
| Name | rs11613829 dbSNP |
|---|---|
| Location | chr:12,40784253 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 31)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11564113 | 1.00[JPT][hapmap] |
| rs11564270 | 0.93[CEU][hapmap];1.00[ASN][1000 genomes] |
| rs17443421 | 1.00[JPT][hapmap] |
| rs17443552 | 1.00[JPT][hapmap] |
| rs17444103 | 1.00[JPT][hapmap] |
| rs17444542 | 1.00[JPT][hapmap] |
| rs17444730 | 1.00[CEU][hapmap] |
| rs17465716 | 1.00[JPT][hapmap] |
| rs17465849 | 1.00[JPT][hapmap] |
| rs17465891 | 1.00[JPT][hapmap] |
| rs17466030 | 1.00[JPT][hapmap] |
| rs17466220 | 1.00[JPT][hapmap] |
| rs17466269 | 1.00[JPT][hapmap] |
| rs17466297 | 1.00[JPT][hapmap] |
| rs17466339 | 1.00[JPT][hapmap] |
| rs17466451 | 1.00[JPT][hapmap] |
| rs17466633 | 1.00[JPT][hapmap] |
| rs17484258 | 1.00[CHB][hapmap] |
| rs17490578 | 1.00[JPT][hapmap] |
| rs17490620 | 1.00[JPT][hapmap] |
| rs17490762 | 1.00[JPT][hapmap] |
| rs17491110 | 1.00[JPT][hapmap] |
| rs17491410 | 1.00[JPT][hapmap] |
| rs17492138 | 1.00[JPT][hapmap] |
| rs17519797 | 1.00[JPT][hapmap] |
| rs17520634 | 1.00[JPT][hapmap] |
| rs17520655 | 1.00[JPT][hapmap] |
| rs28365243 | 1.00[JPT][hapmap] |
| rs3751174 | 1.00[YRI][hapmap] |
| rs61475818 | 0.82[EUR][1000 genomes] |
| rs7966550 | 1.00[CEU][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| MUC19 | Proximal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014