SNP Report

Basic Infomation

Name	rs10875701 dbSNP
Location	chr:12,48311869
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 37)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10747525	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10783221	0.82[EUR][1000 genomes]
rs10875695	0.83[ASN][1000 genomes]
rs10875697	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10875700	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10875702	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10875704	0.86[EUR][1000 genomes]
rs10875706	0.84[EUR][1000 genomes]
rs10875707	0.84[EUR][1000 genomes]
rs10875708	0.84[EUR][1000 genomes]
rs10875709	0.84[EUR][1000 genomes]
rs11168309	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11168311	0.87[EUR][1000 genomes]
rs11168314	0.84[EUR][1000 genomes]
rs11168315	0.83[EUR][1000 genomes]
rs11168316	0.84[EUR][1000 genomes]
rs11168318	0.84[EUR][1000 genomes]
rs11168319	0.82[EUR][1000 genomes]
rs11168320	0.84[EUR][1000 genomes]
rs11568820	0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11829292	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12231071	0.81[AFR][1000 genomes]
rs12304114	0.95[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4254129	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4402365	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4411326	0.84[EUR][1000 genomes]
rs4442605	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4454781	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61920870	0.88[EUR][1000 genomes]
rs7136534	0.96[ASN][1000 genomes]
rs7302235	0.83[ASN][1000 genomes]
rs7303966	0.91[EUR][1000 genomes]
rs7305180	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7308216	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7970314	0.90[EUR][1000 genomes]
rs7975675	0.83[EUR][1000 genomes]
rs7976091	0.98[EUR][1000 genomes];0.80[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
VDR	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)