SNP Report

Basic Infomation

Name	rs61920870 dbSNP
Location	chr:12,48327106
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 36)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10747525	0.83[EUR][1000 genomes]
rs10783221	0.89[EUR][1000 genomes]
rs10875697	0.87[EUR][1000 genomes]
rs10875700	0.88[EUR][1000 genomes]
rs10875701	0.88[EUR][1000 genomes]
rs10875702	0.88[EUR][1000 genomes]
rs10875704	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10875705	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10875706	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10875707	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10875708	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10875709	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11168309	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11168311	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11168313	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11168314	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11168315	0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11168316	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11168318	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11168319	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11168320	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11568820	0.86[EUR][1000 genomes]
rs11829292	0.88[EUR][1000 genomes]
rs12306963	0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12831006	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34381446	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4254129	0.88[EUR][1000 genomes]
rs4402365	0.88[EUR][1000 genomes]
rs4411326	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4442605	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4454781	0.88[EUR][1000 genomes]
rs61920869	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7303966	0.91[EUR][1000 genomes]
rs7308216	0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7975675	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7976091	0.86[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
VDR	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)