SNP Report
Name | rs6700802   dbSNP |
---|---|
Location | chr:1,114391052 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10745340 | 0.85[YRI][hapmap] |
rs10776775 | 0.85[YRI][hapmap] |
rs10858022 | 0.85[YRI][hapmap] |
rs11582409 | 1.00[YRI][hapmap];0.82[AFR][1000 genomes] |
rs11584821 | 1.00[YRI][hapmap] |
rs1217391 | 0.85[YRI][hapmap] |
rs1217392 | 0.85[YRI][hapmap] |
rs17463292 | 0.82[AFR][1000 genomes] |
rs17464525 | 0.85[YRI][hapmap] |
rs17509844 | 0.82[AFR][1000 genomes] |
rs17510162 | 1.00[YRI][hapmap];0.82[AFR][1000 genomes] |
rs35173468 | 0.82[AFR][1000 genomes] |
rs35955172 | 1.00[AMR][1000 genomes] |
rs3761935 | 0.82[AFR][1000 genomes] |
rs3765598 | 1.00[YRI][hapmap];0.82[AFR][1000 genomes] |
rs3789604 | 0.82[AFR][1000 genomes] |
rs3789608 | 0.85[YRI][hapmap];0.82[AFR][1000 genomes] |
rs3789613 | 0.85[YRI][hapmap] |
rs3811021 | 1.00[YRI][hapmap];0.82[AFR][1000 genomes] |
rs3827733 | 1.00[YRI][hapmap];0.82[AFR][1000 genomes] |
rs4839346 | 0.82[AFR][1000 genomes] |
rs55646484 | 0.82[AFR][1000 genomes] |
rs55940960 | 0.82[AFR][1000 genomes] |
rs61742852 | 1.00[AMR][1000 genomes] |
rs6537791 | 1.00[AMR][1000 genomes] |
rs6537796 | 0.85[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs6658523 | 0.82[AFR][1000 genomes] |
rs6661817 | 0.85[YRI][hapmap] |
rs6673379 | 1.00[AMR][1000 genomes] |
rs6693766 | 1.00[AMR][1000 genomes] |
rs6694929 | 1.00[AMR][1000 genomes] |
rs7512645 | 1.00[AMR][1000 genomes] |
rs7519133 | 1.00[AMR][1000 genomes] |
rs7523862 | 0.85[YRI][hapmap] |
rs7524200 | 0.82[YRI][hapmap] |
rs7527562 | 1.00[AMR][1000 genomes] |
rs7545980 | 1.00[AMR][1000 genomes] |
rs7547536 | 1.00[AMR][1000 genomes] |
rs7554422 | 1.00[AMR][1000 genomes] |
rs7556589 | 1.00[AMR][1000 genomes] |
Symbol | Regulation type |
---|---|
HIPK1 | Distal transcriptional regulation |
ENSG00000235527 | Distal transcriptional regulation |
PTPN22 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014