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rVarBase
SNP Report
Basic Infomation
Name
rs61742852  
dbSNP
Location
chr:1,114226153
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs35955172
1.00[AMR][1000 genomes]
rs6537791
1.00[AMR][1000 genomes]
rs6537796
1.00[AMR][1000 genomes]
rs6673379
1.00[AMR][1000 genomes]
rs6693766
1.00[AMR][1000 genomes]
rs6694929
1.00[AMR][1000 genomes]
rs6700802
1.00[AMR][1000 genomes]
rs7512645
1.00[AMR][1000 genomes]
rs7519133
1.00[AMR][1000 genomes]
rs7527562
0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7545980
1.00[AMR][1000 genomes]
rs7547536
1.00[AMR][1000 genomes]
rs7554422
1.00[AMR][1000 genomes]
rs7556589
0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
MAGI3
Proximal transcriptional regulation
HIPK1
Distal transcriptional regulation
ENSG00000235527
Distal transcriptional regulation
AP4B1
Distal transcriptional regulation
DCLRE1B
Distal transcriptional regulation
MAGI3
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)