SNP Report

Basic Infomation

Name	rs11584821 dbSNP
Location	chr:1,114419489
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10745340	0.85[YRI][hapmap]
rs10776775	0.85[YRI][hapmap]
rs10858022	0.85[YRI][hapmap]
rs11582409	1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1217391	0.85[YRI][hapmap]
rs1217392	0.85[YRI][hapmap]
rs17463292	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17464525	0.85[YRI][hapmap]
rs17509844	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs17510162	1.00[CEU][hapmap];0.93[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3195954	0.81[JPT][hapmap];0.85[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34122108	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35173468	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs3761935	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3765598	0.81[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs3789604	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs3789608	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs3789613	0.85[YRI][hapmap]
rs3811021	0.81[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs3827733	0.81[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes]
rs4839000	0.81[JPT][hapmap]
rs4839346	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs55646484	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs55940960	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs55951516	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6537796	0.85[YRI][hapmap]
rs6658523	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6661817	0.85[YRI][hapmap]
rs6700802	1.00[YRI][hapmap]
rs7523862	0.85[YRI][hapmap]
rs7524200	0.82[YRI][hapmap]

rSNP related genes

Symbol	Regulation type
AP4B1	Distal transcriptional regulation
DCLRE1B	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)