SNP Report
Name | rs6670493   dbSNP |
---|---|
Location | chr:1,155956903 |
Allele | C/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10796955 | 1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1111102 | 0.85[CEU][hapmap] |
rs11264422 | 0.82[ASN][1000 genomes] |
rs11264426 | 1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs11585845 | 1.00[CEU][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs12037177 | 0.95[CEU][hapmap] |
rs12118795 | 0.90[CEU][hapmap] |
rs12568523 | 0.95[CEU][hapmap] |
rs1889532 | 1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs1889533 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs2016251 | 0.95[CEU][hapmap] |
rs2282301 | 0.95[CEU][hapmap] |
rs2297649 | 0.95[CEU][hapmap];0.91[EUR][1000 genomes] |
rs4661175 | 0.84[ASN][1000 genomes] |
rs4661217 | 0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4661218 | 1.00[CEU][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61813286 | 0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs6427297 | 0.80[CEU][hapmap] |
rs6667652 | 0.95[CEU][hapmap] |
rs6696019 | 0.95[CEU][hapmap] |
rs7534858 | 1.00[CEU][hapmap];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs867549 | 0.95[CEU][hapmap] |
rs867550 | 0.95[CEU][hapmap] |
rs915178 | 0.85[CEU][hapmap] |
rs915181 | 0.95[CEU][hapmap] |
rs928596 | 1.00[CEU][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ARHGEF2 | Proximal transcriptional regulation |
ENSG00000224276 | Proximal transcriptional regulation |
ENSG00000241471 | RNA binding protein mediated regulation |
ARHGEF2 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014