SNP Report

Basic Infomation

Name	rs6094171 dbSNP
Location	chr:20,44198848
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 38)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1118484	0.85[EUR][1000 genomes]
rs1352261	0.85[EUR][1000 genomes]
rs1487312	0.92[CEU][hapmap]
rs1487318	0.96[CEU][hapmap]
rs1487324	0.93[CEU][hapmap];0.85[EUR][1000 genomes]
rs1825776	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs1843817	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs2425702	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2425703	0.90[EUR][1000 genomes]
rs2425717	0.85[EUR][1000 genomes]
rs2425718	0.85[EUR][1000 genomes]
rs2425720	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs2425721	0.92[CEU][hapmap];0.85[EUR][1000 genomes]
rs3092443	0.89[CEU][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3092516	1.00[CEU][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs3092769	0.85[EUR][1000 genomes]
rs4402827	0.89[CEU][hapmap]
rs6017593	0.85[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6032259	0.81[CEU][hapmap];0.95[JPT][hapmap];0.80[AMR][1000 genomes]
rs6032263	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6032264	0.82[CEU][hapmap];0.95[JPT][hapmap];0.85[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6032265	0.85[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6032266	0.82[CEU][hapmap];0.95[JPT][hapmap];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6032274	0.86[YRI][hapmap]
rs6032275	0.89[CEU][hapmap]
rs6032276	0.89[CEU][hapmap]
rs6032308	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[YRI][hapmap];0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6032339	0.82[CEU][hapmap]
rs6032340	0.82[CEU][hapmap]
rs6032343	0.83[CEU][hapmap]
rs6032346	0.93[CEU][hapmap];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6032409	1.00[CEU][hapmap]
rs6032445	0.92[CEU][hapmap]
rs6073773	0.85[CEU][hapmap];0.95[JPT][hapmap];0.85[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6073781	0.86[AFR][1000 genomes]
rs719998	0.88[AFR][1000 genomes]
rs7264976	0.81[CEU][hapmap]
rs909879	0.93[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCNB1IP1P2	Proximal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)