SNP Report

Basic Infomation

Name	rs3092443 dbSNP
Location	chr:20,44220176
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 32)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1118484	0.94[EUR][1000 genomes]
rs1352261	0.94[EUR][1000 genomes]
rs1487312	0.89[CEU][hapmap]
rs1487318	0.92[CEU][hapmap];1.00[JPT][hapmap]
rs1487324	0.89[CEU][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes]
rs1825776	0.88[CEU][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes]
rs1843817	0.88[CEU][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes]
rs2425702	0.91[EUR][1000 genomes]
rs2425703	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2425717	0.95[EUR][1000 genomes]
rs2425718	0.95[EUR][1000 genomes]
rs2425720	0.88[CEU][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes]
rs2425721	0.88[CEU][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes]
rs3091440	0.85[EUR][1000 genomes]
rs3092516	0.89[CEU][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3092769	0.94[EUR][1000 genomes]
rs4402827	0.84[CEU][hapmap]
rs4812926	1.00[ASN][1000 genomes]
rs4812927	1.00[ASN][1000 genomes]
rs57561497	1.00[ASN][1000 genomes]
rs57861712	1.00[ASN][1000 genomes]
rs6032275	0.85[CEU][hapmap]
rs6032276	0.85[CEU][hapmap]
rs6032308	0.85[CEU][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6032346	0.81[CEU][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6032409	0.92[CEU][hapmap];1.00[JPT][hapmap];0.83[EUR][1000 genomes]
rs6032445	0.89[CEU][hapmap];1.00[JPT][hapmap]
rs6065841	1.00[ASN][1000 genomes]
rs6073773	0.81[CEU][hapmap]
rs6094171	0.89[CEU][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73129019	0.86[ASN][1000 genomes]
rs909879	0.82[CEU][hapmap];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
EPPIN	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)