SNP Report
Name | rs6073781   dbSNP |
---|---|
Location | chr:20,44185500 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1157672 | 0.87[EUR][1000 genomes] |
rs1487322 | 0.88[EUR][1000 genomes] |
rs1487323 | 0.87[EUR][1000 genomes] |
rs2092369 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs2103658 | 0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs2143224 | 0.83[AMR][1000 genomes];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs2143225 | 0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs2179457 | 0.87[EUR][1000 genomes] |
rs2425723 | 0.87[EUR][1000 genomes] |
rs2425724 | 0.86[EUR][1000 genomes] |
rs2425732 | 0.87[EUR][1000 genomes] |
rs2425733 | 0.87[EUR][1000 genomes] |
rs2425734 | 0.87[EUR][1000 genomes] |
rs3091838 | 0.87[EUR][1000 genomes] |
rs3091839 | 0.89[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs3091917 | 0.87[EUR][1000 genomes] |
rs3092029 | 0.88[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs3092373 | 0.87[EUR][1000 genomes] |
rs3092666 | 0.87[EUR][1000 genomes] |
rs6017589 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs6017597 | 0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6017598 | 0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6017599 | 0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6032227 | 0.81[AMR][1000 genomes] |
rs6032267 | 0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6032271 | 0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs6032274 | 0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs6032308 | 0.86[AFR][1000 genomes] |
rs6094171 | 0.86[AFR][1000 genomes] |
rs6124715 | 0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs6130852 | 0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs719998 | 0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs765156 | 0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs909879 | 0.88[AFR][1000 genomes] |
rs988463 | 0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
RNA5SP485 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014