SNP Report
Name | rs6032263   dbSNP |
---|---|
Location | chr:20,44145615 |
Allele | T/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs2425702 | 0.81[AMR][1000 genomes] |
rs3092516 | 0.85[AMR][1000 genomes] |
rs6017593 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6017598 | 0.84[AFR][1000 genomes] |
rs6017599 | 0.84[AFR][1000 genomes] |
rs6032259 | 0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs6032264 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6032265 | 0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6032266 | 0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6032267 | 0.86[AFR][1000 genomes] |
rs6032308 | 0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs6032346 | 0.81[AMR][1000 genomes];0.81[EUR][1000 genomes] |
rs6073773 | 0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs6094171 | 0.83[AMR][1000 genomes];0.81[ASN][1000 genomes] |
rs909879 | 0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
SPINT3 | Proximal transcriptional regulation |
TNNC2 | Distal transcriptional regulation |
SNX21 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014