SNP Report

Basic Infomation

Name	rs2590303 dbSNP
Location	chr:10,60074817
Allele	A/C

LD-proxy of rSNPs(r²>0.8) (count: 40)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10509087	1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes]
rs16911916	0.91[JPT][hapmap];0.82[ASN][1000 genomes]
rs16911920	1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes]
rs16912053	1.00[CHB][hapmap];0.95[JPT][hapmap];0.96[ASN][1000 genomes]
rs16912145	0.86[CHB][hapmap];0.92[CHD][hapmap];0.80[GIH][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs16912161	0.85[JPT][hapmap]
rs16912166	0.85[JPT][hapmap]
rs1890659	0.93[CHB][hapmap];0.95[JPT][hapmap];0.96[ASN][1000 genomes]
rs1934334	0.96[ASN][1000 genomes]
rs1934335	0.96[ASN][1000 genomes]
rs2174021	1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes]
rs2275443	0.82[ASN][1000 genomes]
rs2306605	0.85[JPT][hapmap]
rs2590288	0.85[ASN][1000 genomes]
rs2590289	1.00[CHB][hapmap];0.97[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];0.92[MKK][hapmap];0.96[ASN][1000 genomes]
rs2590290	0.96[ASN][1000 genomes]
rs2590291	0.96[ASN][1000 genomes]
rs2590292	0.96[ASN][1000 genomes]
rs2590317	0.90[JPT][hapmap]
rs2790156	0.90[JPT][hapmap]
rs2790180	0.94[ASN][1000 genomes]
rs2790190	1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[YRI][hapmap];0.94[ASN][1000 genomes]
rs2790195	0.96[ASN][1000 genomes]
rs2790196	1.00[CHB][hapmap];0.97[CHD][hapmap];0.81[GIH][hapmap];0.95[JPT][hapmap];0.92[MKK][hapmap];0.96[ASN][1000 genomes]
rs2790197	1.00[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs2893772	0.85[ASN][1000 genomes]
rs3956816	1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes]
rs58890033	0.81[EUR][1000 genomes]
rs7069613	0.89[JPT][hapmap]
rs7070901	0.82[ASN][1000 genomes]
rs7071333	1.00[CHB][hapmap];0.89[JPT][hapmap];0.82[ASN][1000 genomes]
rs7073090	1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes]
rs7073539	1.00[CHB][hapmap];0.95[JPT][hapmap];0.96[ASN][1000 genomes]
rs7082548	0.82[ASN][1000 genomes]
rs714113	1.00[CHB][hapmap];0.97[CHD][hapmap];0.86[GIH][hapmap];0.95[JPT][hapmap];0.92[MKK][hapmap];0.96[ASN][1000 genomes]
rs72795631	0.82[ASN][1000 genomes]
rs72795634	0.82[ASN][1000 genomes]
rs7903198	1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes]
rs7907565	0.82[ASN][1000 genomes]
rs965867	1.00[CHB][hapmap];0.97[CHD][hapmap];0.95[JPT][hapmap];0.96[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000261076	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)