SNP Report

Basic Infomation

Name	rs72795634 dbSNP
Location	chr:10,59944002
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 40)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10509087	0.99[ASN][1000 genomes]
rs11818436	0.84[EUR][1000 genomes]
rs16911916	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16911920	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16912053	0.83[ASN][1000 genomes]
rs1890659	0.83[ASN][1000 genomes]
rs1934334	0.83[ASN][1000 genomes]
rs1934335	0.83[ASN][1000 genomes]
rs2174021	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2275443	0.99[ASN][1000 genomes]
rs2590289	0.83[ASN][1000 genomes]
rs2590290	0.83[ASN][1000 genomes]
rs2590291	0.83[ASN][1000 genomes]
rs2590292	0.83[ASN][1000 genomes]
rs2590303	0.82[ASN][1000 genomes]
rs2790180	0.85[ASN][1000 genomes]
rs2790190	0.82[ASN][1000 genomes]
rs2790195	0.83[ASN][1000 genomes]
rs2790196	0.83[ASN][1000 genomes]
rs3956816	1.00[ASN][1000 genomes]
rs7070901	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7071333	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7073090	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7073539	0.83[ASN][1000 genomes]
rs7082548	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs714113	0.83[ASN][1000 genomes]
rs72795629	0.86[EUR][1000 genomes]
rs72795630	0.87[EUR][1000 genomes]
rs72795631	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72795633	0.87[EUR][1000 genomes]
rs72795645	0.84[EUR][1000 genomes]
rs72795650	0.84[EUR][1000 genomes]
rs72795652	0.84[EUR][1000 genomes]
rs72795657	0.84[EUR][1000 genomes]
rs72795664	0.84[EUR][1000 genomes]
rs72795671	0.82[EUR][1000 genomes]
rs72795672	0.82[EUR][1000 genomes]
rs7903198	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7907565	0.97[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs965867	0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CISD1	Distal transcriptional regulation
IPMK	Distal transcriptional regulation
TFAM	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)