SNP Report
Name | rs1934335   dbSNP |
---|---|
Location | chr:10,60060628 |
Allele | C/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10509087 | 0.83[ASN][1000 genomes] |
rs1582159 | 0.87[EUR][1000 genomes] |
rs16911916 | 0.83[ASN][1000 genomes] |
rs16911920 | 0.83[ASN][1000 genomes] |
rs16912053 | 1.00[ASN][1000 genomes] |
rs16912145 | 0.89[ASN][1000 genomes] |
rs1832557 | 0.87[EUR][1000 genomes] |
rs1890659 | 1.00[ASN][1000 genomes] |
rs1934334 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2174021 | 0.83[ASN][1000 genomes] |
rs2275443 | 0.82[ASN][1000 genomes] |
rs2486484 | 0.87[EUR][1000 genomes] |
rs2590288 | 0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs2590289 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2590290 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2590291 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2590292 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2590303 | 0.96[ASN][1000 genomes] |
rs2590332 | 0.87[EUR][1000 genomes] |
rs2790148 | 0.87[EUR][1000 genomes] |
rs2790180 | 0.87[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2790183 | 0.87[EUR][1000 genomes] |
rs2790190 | 0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs2790192 | 0.87[EUR][1000 genomes] |
rs2790195 | 0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2790196 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2790197 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs2790233 | 0.87[EUR][1000 genomes] |
rs2893772 | 0.89[ASN][1000 genomes] |
rs2893773 | 0.82[ASN][1000 genomes] |
rs3956816 | 0.83[ASN][1000 genomes] |
rs7070901 | 0.83[ASN][1000 genomes] |
rs7071333 | 0.83[ASN][1000 genomes] |
rs7073090 | 0.83[ASN][1000 genomes] |
rs7073539 | 1.00[ASN][1000 genomes] |
rs7082548 | 0.83[ASN][1000 genomes] |
rs714113 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs72795631 | 0.83[ASN][1000 genomes] |
rs72795634 | 0.83[ASN][1000 genomes] |
rs7903198 | 0.83[ASN][1000 genomes] |
rs7907565 | 0.83[ASN][1000 genomes] |
rs965867 | 0.83[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000228527 | Proximal transcriptional regulation |
TFAM | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014