SNP Report
Basic Infomation
| Name | rs2893772 dbSNP |
|---|---|
| Location | chr:10,60061500 |
| Allele | T/G |
LD-proxy of rSNPs(r2>0.8) (count: 19)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs16912053 | 0.89[ASN][1000 genomes] |
| rs1890659 | 0.89[ASN][1000 genomes] |
| rs1934334 | 0.89[ASN][1000 genomes] |
| rs1934335 | 0.89[ASN][1000 genomes] |
| rs2590288 | 0.86[ASN][1000 genomes] |
| rs2590289 | 0.89[ASN][1000 genomes] |
| rs2590290 | 0.89[ASN][1000 genomes] |
| rs2590291 | 0.89[ASN][1000 genomes] |
| rs2590292 | 0.89[ASN][1000 genomes] |
| rs2590303 | 0.85[ASN][1000 genomes] |
| rs2790180 | 0.87[ASN][1000 genomes] |
| rs2790190 | 0.87[ASN][1000 genomes] |
| rs2790195 | 0.89[ASN][1000 genomes] |
| rs2790196 | 0.89[ASN][1000 genomes] |
| rs2790197 | 0.83[ASN][1000 genomes] |
| rs2893773 | 0.89[ASN][1000 genomes] |
| rs7073539 | 0.89[ASN][1000 genomes] |
| rs714113 | 0.89[ASN][1000 genomes] |
| rs965867 | 0.89[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000228527 | Proximal transcriptional regulation |
| TFAM | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014