SNP Report

Basic Infomation

Name	rs7082548 dbSNP
Location	chr:10,59945058
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 41)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10509087	0.98[ASN][1000 genomes]
rs11818436	0.87[EUR][1000 genomes]
rs16911916	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16911920	0.92[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16912053	0.83[ASN][1000 genomes]
rs1890659	0.83[ASN][1000 genomes]
rs1934334	0.83[ASN][1000 genomes]
rs1934335	0.83[ASN][1000 genomes]
rs2174021	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2275443	0.98[ASN][1000 genomes]
rs2590289	0.83[ASN][1000 genomes]
rs2590290	0.83[ASN][1000 genomes]
rs2590291	0.83[ASN][1000 genomes]
rs2590292	0.83[ASN][1000 genomes]
rs2590303	0.82[ASN][1000 genomes]
rs2790180	0.84[ASN][1000 genomes]
rs2790190	0.81[ASN][1000 genomes]
rs2790195	0.83[ASN][1000 genomes]
rs2790196	0.83[ASN][1000 genomes]
rs3956816	0.99[ASN][1000 genomes]
rs7070901	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7071333	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7073090	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7073539	0.83[ASN][1000 genomes]
rs714113	0.83[ASN][1000 genomes]
rs72795629	0.83[EUR][1000 genomes]
rs72795630	0.84[EUR][1000 genomes]
rs72795631	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72795633	0.84[EUR][1000 genomes]
rs72795634	0.94[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72795645	0.87[EUR][1000 genomes]
rs72795650	0.87[EUR][1000 genomes]
rs72795652	0.87[EUR][1000 genomes]
rs72795657	0.87[EUR][1000 genomes]
rs72795664	0.87[EUR][1000 genomes]
rs72795671	0.84[EUR][1000 genomes]
rs72795672	0.84[EUR][1000 genomes]
rs72795677	0.82[EUR][1000 genomes]
rs7903198	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7907565	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs965867	0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CISD1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)