SNP Report

Basic Infomation

Name	rs9368276 dbSNP
Location	chr:6,21101675
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 38)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10080639	0.87[JPT][hapmap]
rs10498700	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs10806931	0.83[CEU][hapmap];0.83[CHB][hapmap];0.83[CHD][hapmap];0.93[GIH][hapmap];0.93[JPT][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10946430	0.82[JPT][hapmap]
rs11757294	0.82[JPT][hapmap]
rs11963654	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13203959	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13214341	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2446484	0.82[JPT][hapmap]
rs2446487	0.82[JPT][hapmap]
rs2446489	0.82[JPT][hapmap]
rs2493869	0.82[JPT][hapmap]
rs34865903	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4315997	0.81[JPT][hapmap]
rs4382241	0.89[CEU][hapmap]
rs4401656	0.87[ASW][hapmap]
rs4479917	0.92[JPT][hapmap]
rs4569951	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60248721	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6923546	0.80[CHB][hapmap];0.82[JPT][hapmap]
rs6936205	1.00[CEU][hapmap];0.94[CHB][hapmap];0.92[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73381509	0.87[ASN][1000 genomes]
rs7741436	0.82[JPT][hapmap]
rs7751485	0.82[JPT][hapmap]
rs9295491	1.00[CEU][hapmap];0.80[JPT][hapmap];0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9350318	0.83[CEU][hapmap];0.86[GIH][hapmap];0.93[JPT][hapmap];0.90[MEX][hapmap];0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9350319	1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[JPT][hapmap];0.80[TSI][hapmap];0.94[ASN][1000 genomes]
rs9356762	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs9356764	0.80[CHB][hapmap];0.94[JPT][hapmap]
rs9356765	0.81[JPT][hapmap]
rs9358388	0.82[EUR][1000 genomes]
rs9358391	1.00[CHB][hapmap];1.00[CHD][hapmap];0.94[JPT][hapmap];0.92[ASN][1000 genomes]
rs9358393	0.82[JPT][hapmap]
rs9366375	1.00[CEU][hapmap];0.80[GIH][hapmap];0.81[MEX][hapmap];0.85[TSI][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9366376	0.83[CHB][hapmap];0.83[CHD][hapmap];0.96[GIH][hapmap];0.93[JPT][hapmap];0.81[ASN][1000 genomes]
rs9366377	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9366378	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9368275	0.94[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)