SNP Report

Basic Infomation

Name	rs10806931 dbSNP
Location	chr:6,21086440
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10080639	0.89[CHB][hapmap];0.93[JPT][hapmap];0.81[ASN][1000 genomes]
rs10498700	0.88[CEU][hapmap];0.86[EUR][1000 genomes]
rs11963654	0.84[CEU][hapmap];0.85[EUR][1000 genomes]
rs13203959	0.84[CEU][hapmap];0.87[JPT][hapmap];0.89[EUR][1000 genomes]
rs13214341	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34865903	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs4479917	0.93[JPT][hapmap]
rs4569951	0.83[CEU][hapmap];0.82[CHB][hapmap];0.92[JPT][hapmap];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs60248721	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6936205	0.82[CEU][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs73381509	0.81[ASN][1000 genomes]
rs9295491	0.84[CEU][hapmap];0.87[JPT][hapmap];0.89[EUR][1000 genomes]
rs9350318	1.00[CEU][hapmap];0.89[CHB][hapmap];0.81[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[TSI][hapmap];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9350319	0.83[CHB][hapmap];0.83[CHD][hapmap];0.87[JPT][hapmap];0.81[ASN][1000 genomes]
rs9356762	1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs9356764	0.88[JPT][hapmap]
rs9358388	0.84[CEU][hapmap];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9358391	0.83[CHB][hapmap];0.82[CHD][hapmap];0.87[JPT][hapmap]
rs9366375	0.83[CEU][hapmap];0.84[CHB][hapmap];0.80[GIH][hapmap];0.81[TSI][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9366376	1.00[CHB][hapmap];0.97[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs9366377	0.87[CEU][hapmap];0.93[JPT][hapmap];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9366378	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9368275	0.81[ASN][1000 genomes]
rs9368276	0.83[CEU][hapmap];0.83[CHB][hapmap];0.83[CHD][hapmap];0.93[GIH][hapmap];0.93[JPT][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)