SNP Report

Basic Infomation

Name	rs9366375 dbSNP
Location	chr:6,21079573
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 18)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10080639	0.95[CHB][hapmap];0.90[CHD][hapmap];0.87[ASN][1000 genomes]
rs10498700	1.00[CEU][hapmap];1.00[YRI][hapmap];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10806931	0.83[CEU][hapmap];0.84[CHB][hapmap];0.80[GIH][hapmap];0.81[TSI][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11963654	1.00[CEU][hapmap];0.83[CHB][hapmap];0.87[JPT][hapmap];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13203959	1.00[CEU][hapmap];0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13214341	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs34865903	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4382241	0.89[CEU][hapmap];0.82[EUR][1000 genomes]
rs4569951	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs60248721	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6936205	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9295491	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs9350318	0.81[ASW][hapmap];0.83[CEU][hapmap];0.95[CHB][hapmap];0.92[CHD][hapmap];0.87[GIH][hapmap];0.95[MEX][hapmap];0.85[TSI][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9358388	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9366376	0.90[ASW][hapmap];0.85[CHB][hapmap];0.83[GIH][hapmap];0.86[LWK][hapmap];0.90[MEX][hapmap];0.86[TSI][hapmap];0.82[YRI][hapmap];0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs9366377	1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9366378	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9368276	1.00[CEU][hapmap];0.80[GIH][hapmap];0.81[MEX][hapmap];0.85[TSI][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)