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rVarBase
SNP Report
Basic Infomation
Name
rs9368275  
dbSNP
Location
chr:6,21099666
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 14)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10806931
0.81[ASN][1000 genomes]
rs13214341
0.84[ASN][1000 genomes]
rs34865903
0.91[ASN][1000 genomes]
rs4569951
0.92[ASN][1000 genomes]
rs60248721
0.91[ASN][1000 genomes]
rs6936205
0.91[ASN][1000 genomes]
rs73381509
0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9350319
0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9356762
0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9358391
0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9366376
0.81[ASN][1000 genomes]
rs9366377
0.95[ASN][1000 genomes]
rs9366378
0.92[ASN][1000 genomes]
rs9368276
0.94[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
CDKAL1
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)