SNP Report
| Name | rs910396   dbSNP |
|---|---|
| Location | chr:20,44443766 |
| Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs13037551 | 0.91[AFR][1000 genomes];0.92[ASN][1000 genomes] |
| rs2077004 | 0.88[EUR][1000 genomes] |
| rs2138546 | 0.81[EUR][1000 genomes] |
| rs2664539 | 0.88[ASN][1000 genomes] |
| rs2664591 | 0.88[EUR][1000 genomes] |
| rs368622 | 0.95[EUR][1000 genomes] |
| rs373018 | 0.88[ASN][1000 genomes] |
| rs3848711 | 0.93[ASN][1000 genomes] |
| rs390386 | 0.93[ASN][1000 genomes] |
| rs399672 | 0.95[EUR][1000 genomes] |
| rs411945 | 0.88[EUR][1000 genomes] |
| rs445503 | 0.84[AFR][1000 genomes];0.93[ASN][1000 genomes] |
| rs4629 | 0.88[ASN][1000 genomes] |
| rs567348 | 0.81[EUR][1000 genomes] |
| rs6017692 | 0.85[EUR][1000 genomes] |
| rs6032524 | 0.81[EUR][1000 genomes] |
| rs6032531 | 0.90[ASN][1000 genomes] |
| rs6032536 | 0.88[EUR][1000 genomes] |
| rs6032537 | 0.88[EUR][1000 genomes] |
| rs6032538 | 0.88[EUR][1000 genomes] |
| rs6032541 | 0.90[ASN][1000 genomes] |
| rs6032545 | 0.92[ASN][1000 genomes] |
| rs6065886 | 0.87[ASN][1000 genomes] |
| rs6073910 | 0.81[EUR][1000 genomes] |
| rs6104350 | 0.93[ASN][1000 genomes] |
| rs6104355 | 0.93[ASN][1000 genomes] |
| rs6124741 | 0.88[ASN][1000 genomes] |
| rs6130929 | 0.84[ASN][1000 genomes] |
| rs811657 | 0.92[ASN][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| PCIF1 | Distal transcriptional regulation |
| ZNF335 | Distal transcriptional regulation |
| TNNC2 | Distal transcriptional regulation |
| SNX21 | Distal transcriptional regulation |
| ACOT8 | Distal transcriptional regulation |
| ZSWIM3 | Distal transcriptional regulation |
| UBE2C | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




