SNP Report
Name | rs6913323   dbSNP |
---|---|
Location | chr:6,20891190 |
Allele | A/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10806923 | 0.93[CHB][hapmap];0.84[JPT][hapmap];0.80[ASN][1000 genomes] |
rs10946405 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes] |
rs10946406 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs10946415 | 0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs10946416 | 1.00[CEU][hapmap];0.93[CHB][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs12190376 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes] |
rs12194583 | 0.92[CHB][hapmap];0.92[ASN][1000 genomes] |
rs12662176 | 0.84[ASN][1000 genomes] |
rs13214325 | 0.83[ASN][1000 genomes] |
rs2745929 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes] |
rs2819990 | 0.82[ASN][1000 genomes] |
rs34801493 | 0.83[ASN][1000 genomes] |
rs4077404 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs4351239 | 0.94[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs4363020 | 0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs4475313 | 0.85[ASN][1000 genomes] |
rs4510656 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs4546483 | 1.00[CEU][hapmap];0.93[CHB][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs4612156 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs4626408 | 0.92[ASN][1000 genomes] |
rs4644038 | 0.94[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes] |
rs4645410 | 0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs4710945 | 0.93[CHB][hapmap];1.00[JPT][hapmap] |
rs4710946 | 0.94[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs4712539 | 0.94[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes] |
rs4712540 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs4712561 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes] |
rs4712562 | 0.93[CHB][hapmap];0.87[ASN][1000 genomes] |
rs4712564 | 0.81[CEU][hapmap] |
rs60702402 | 0.88[ASN][1000 genomes] |
rs6910215 | 0.83[ASN][1000 genomes] |
rs6910326 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs6918643 | 0.90[ASN][1000 genomes] |
rs6938256 | 0.82[CEU][hapmap] |
rs7453352 | 0.92[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs7747724 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes] |
rs7765413 | 0.94[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes] |
rs9356756 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes] |
rs9465877 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes] |
rs9465879 | 0.85[ASN][1000 genomes] |
rs9465880 | 0.93[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs9465883 | 0.83[ASN][1000 genomes] |
rs9465888 | 0.94[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes] |
rs9465889 | 0.94[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes] |
rs9465890 | 1.00[CHB][hapmap];0.94[JPT][hapmap];0.87[ASN][1000 genomes] |
rs9465895 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes] |
rs9465912 | 0.94[ASN][1000 genomes] |
rs9465923 | 0.81[CEU][hapmap];0.93[CHB][hapmap];0.92[ASN][1000 genomes] |
rs9465925 | 0.81[CEU][hapmap];0.93[CHB][hapmap];0.92[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
CDKAL1 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014