SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 23)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10946405	0.84[ASN][1000 genomes]
rs10946415	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10946416	1.00[ASN][1000 genomes]
rs12194583	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12215519	0.80[EUR][1000 genomes]
rs12662176	0.91[ASN][1000 genomes]
rs4077404	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4546483	0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs4612156	0.81[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs4645410	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4712561	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4712562	0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4712564	0.92[EUR][1000 genomes]
rs60702402	0.80[ASN][1000 genomes]
rs6913323	0.92[ASN][1000 genomes]
rs6918643	0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72657618	0.98[EUR][1000 genomes]
rs9356756	0.83[ASN][1000 genomes]
rs9465890	0.81[ASN][1000 genomes]
rs9465895	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9465912	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9465923	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9465925	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SOX4	Distal transcriptional regulation
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)