SNP Report

Basic Infomation

Name	rs2819107 dbSNP
Location	chr:10,81680976
Allele	A/G/C

LD-proxy of rSNPs(r²>0.8) (count: 55)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1054053	0.95[CEU][hapmap];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10788338	0.81[CEU][hapmap]
rs11201011	0.81[CEU][hapmap]
rs1923537	0.89[CHB][hapmap];0.85[JPT][hapmap];0.84[ASN][1000 genomes]
rs1923538	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs1923540	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1923542	0.85[ASN][1000 genomes]
rs2146188	0.84[ASN][1000 genomes]
rs2146189	0.80[EUR][1000 genomes]
rs2243639	1.00[CEU][hapmap];0.82[AMR][1000 genomes]
rs2246111	0.83[AMR][1000 genomes]
rs2246698	0.84[CHB][hapmap];0.86[JPT][hapmap];0.85[ASN][1000 genomes]
rs2250135	0.85[ASN][1000 genomes]
rs2250360	0.84[ASN][1000 genomes]
rs2250473	0.81[EUR][1000 genomes]
rs2250478	0.81[ASN][1000 genomes]
rs2250617	0.95[CEU][hapmap];0.80[EUR][1000 genomes]
rs2255601	0.82[CEU][hapmap]
rs2256167	0.89[CHB][hapmap];0.85[JPT][hapmap];0.87[ASN][1000 genomes]
rs2256573	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2256574	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2256581	0.89[CHB][hapmap];0.85[JPT][hapmap];0.89[ASN][1000 genomes]
rs2256588	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.80[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2256703	0.89[CHB][hapmap];0.85[JPT][hapmap];0.88[ASN][1000 genomes]
rs2258874	1.00[CEU][hapmap];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2260653	0.82[EUR][1000 genomes]
rs2475634	0.81[EUR][1000 genomes]
rs2758541	1.00[CEU][hapmap];0.80[EUR][1000 genomes]
rs2758545	1.00[CEU][hapmap];0.82[AMR][1000 genomes]
rs2758550	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs2758551	0.89[CHB][hapmap];0.86[JPT][hapmap];0.87[ASN][1000 genomes]
rs2758553	0.87[ASN][1000 genomes]
rs2758554	0.89[CHB][hapmap];0.85[JPT][hapmap];0.86[ASN][1000 genomes]
rs2758555	1.00[CEU][hapmap];0.83[AMR][1000 genomes]
rs2758556	1.00[CEU][hapmap];0.83[AMR][1000 genomes]
rs2758557	0.84[ASN][1000 genomes]
rs2758558	0.87[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2758561	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs2819097	1.00[CEU][hapmap];0.81[AMR][1000 genomes]
rs2819098	0.81[AMR][1000 genomes]
rs2819099	0.81[AMR][1000 genomes]
rs2819100	0.81[AMR][1000 genomes]
rs2819101	0.82[AMR][1000 genomes]
rs2819102	0.81[AMR][1000 genomes]
rs2819104	0.82[AMR][1000 genomes]
rs2819105	0.89[CHB][hapmap];0.86[JPT][hapmap];0.88[ASN][1000 genomes]
rs2819106	1.00[CEU][hapmap];0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2819108	1.00[CEU][hapmap]
rs4335482	0.86[CEU][hapmap]
rs55684723	0.80[EUR][1000 genomes]
rs55975359	0.80[EUR][1000 genomes]
rs56311055	0.80[EUR][1000 genomes]
rs7893691	0.87[ASN][1000 genomes]
rs7905105	0.83[AMR][1000 genomes]
rs9421727	1.00[CEU][hapmap];0.80[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
MBL1P	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)