SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 17)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1923537	0.91[CHB][hapmap];0.95[CHD][hapmap];0.87[JPT][hapmap];0.86[ASN][1000 genomes]
rs1923542	0.84[ASN][1000 genomes]
rs2146188	0.82[ASN][1000 genomes]
rs2246698	0.87[CHB][hapmap];0.82[JPT][hapmap];0.84[ASN][1000 genomes]
rs2250135	0.84[ASN][1000 genomes]
rs2250360	0.83[ASN][1000 genomes]
rs2256167	0.91[CHB][hapmap];0.86[JPT][hapmap];0.89[ASN][1000 genomes]
rs2256581	0.91[CHB][hapmap];0.98[CHD][hapmap];0.87[JPT][hapmap];0.92[ASN][1000 genomes]
rs2256588	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2256703	0.91[CHB][hapmap];0.93[CHD][hapmap];0.87[JPT][hapmap];0.89[ASN][1000 genomes]
rs2758551	0.91[CHB][hapmap];0.87[JPT][hapmap];0.89[ASN][1000 genomes]
rs2758553	0.89[ASN][1000 genomes]
rs2758554	0.91[CHB][hapmap];0.98[CHD][hapmap];0.87[JPT][hapmap];0.89[ASN][1000 genomes]
rs2758557	0.86[ASN][1000 genomes]
rs2819105	0.91[CHB][hapmap];0.87[JPT][hapmap];0.91[ASN][1000 genomes]
rs2819107	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7893691	0.89[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
MBL1P	Distal transcriptional regulation
MBL1P	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 5)