SNP Report

Basic Infomation

Name	rs2331704 dbSNP
Location	chr:14,68906833
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 42)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10438157	0.82[EUR][1000 genomes]
rs10454686	0.85[CEU][hapmap]
rs10747299	0.85[ASN][1000 genomes]
rs11158737	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11158742	1.00[JPT][hapmap]
rs12435006	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs12588330	1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs12889206	1.00[MEX][hapmap]
rs12897307	1.00[JPT][hapmap];0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12897678	0.86[EUR][1000 genomes]
rs17755674	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1956538	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs2064910	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2331703	0.86[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2525507	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2753403	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2842320	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3784118	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs3966077	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs4899241	0.85[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap]
rs4899243	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap]
rs4902571	0.90[CEU][hapmap];1.00[MEX][hapmap]
rs4902578	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4902580	1.00[CHD][hapmap];0.97[GIH][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs4902581	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs4902582	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902587	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902588	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902589	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6573834	1.00[MEX][hapmap]
rs7145422	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs7150454	1.00[MEX][hapmap]
rs7152152	0.97[GIH][hapmap]
rs8003606	1.00[CHB][hapmap]
rs8009876	1.00[MEX][hapmap]
rs8013026	0.85[CEU][hapmap]
rs8015516	0.90[CEU][hapmap];0.86[MEX][hapmap]
rs8019592	0.85[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap]
rs9323510	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9323511	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9743896	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs975422	0.89[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)