SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10132981	0.99[EUR][1000 genomes]
rs10454686	0.94[CEU][hapmap];0.99[EUR][1000 genomes]
rs11158737	0.90[CEU][hapmap];0.82[EUR][1000 genomes]
rs12589872	0.97[EUR][1000 genomes]
rs12889206	0.86[MEX][hapmap]
rs17755674	0.84[CEU][hapmap]
rs1956538	0.94[CEU][hapmap];0.97[EUR][1000 genomes]
rs1964854	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2064910	1.00[CEU][hapmap];0.98[EUR][1000 genomes]
rs2331703	0.89[CEU][hapmap];0.86[MEX][hapmap]
rs2331704	0.90[CEU][hapmap];0.86[MEX][hapmap]
rs2525507	0.90[CEU][hapmap];0.86[MEX][hapmap]
rs2753403	0.90[CEU][hapmap]
rs2842320	0.90[CEU][hapmap]
rs2877475	0.91[EUR][1000 genomes]
rs3784118	0.83[CEU][hapmap];0.80[EUR][1000 genomes]
rs3966077	0.94[CEU][hapmap];0.97[EUR][1000 genomes]
rs4902571	1.00[CEU][hapmap];0.97[GIH][hapmap];0.86[MEX][hapmap];1.00[TSI][hapmap];0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4902578	0.95[CEU][hapmap];0.86[EUR][1000 genomes]
rs4902587	0.90[CEU][hapmap]
rs4902588	0.90[CEU][hapmap]
rs4902589	0.90[CEU][hapmap]
rs6573834	0.86[MEX][hapmap]
rs7145422	1.00[CEU][hapmap];0.95[EUR][1000 genomes]
rs7150454	0.86[MEX][hapmap]
rs8009876	0.86[MEX][hapmap]
rs8013026	0.94[CEU][hapmap];1.00[EUR][1000 genomes]
rs8019592	0.85[GIH][hapmap]
rs9323510	0.90[CEU][hapmap]
rs975422	1.00[CEU][hapmap];0.98[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)