SNP Report
Basic Infomation
| Name | rs10747299 dbSNP |
|---|---|
| Location | chr:14,68888659 |
| Allele | T/C |
LD-proxy of rSNPs(r2>0.8) (count: 18)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs12435006 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12588330 | 0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12590319 | 0.81[EUR][1000 genomes] |
| rs12897307 | 0.85[ASN][1000 genomes] |
| rs2331703 | 0.85[ASN][1000 genomes] |
| rs2331704 | 0.85[ASN][1000 genomes] |
| rs2753403 | 0.85[ASN][1000 genomes] |
| rs4899241 | 0.87[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs4902580 | 0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4902581 | 0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4902582 | 0.85[ASN][1000 genomes] |
| rs4902587 | 0.85[ASN][1000 genomes] |
| rs4902588 | 0.85[ASN][1000 genomes] |
| rs4902589 | 0.85[ASN][1000 genomes] |
| rs7154175 | 0.94[AMR][1000 genomes];0.97[EUR][1000 genomes] |
| rs8019592 | 0.89[EUR][1000 genomes];0.86[ASN][1000 genomes] |
| rs9323510 | 0.85[ASN][1000 genomes] |
| rs9743896 | 0.85[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| PPIAP6 | RNA binding protein mediated regulation |
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014