SNP Report

Basic Infomation

Name	rs12435006 dbSNP
Location	chr:14,68887123
Allele	G/C

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10747299	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158737	1.00[JPT][hapmap];0.83[YRI][hapmap]
rs11158742	1.00[JPT][hapmap]
rs12588330	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12590319	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12897307	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs17755674	1.00[JPT][hapmap]
rs1956538	1.00[JPT][hapmap]
rs2064910	1.00[JPT][hapmap]
rs2331703	0.85[ASN][1000 genomes]
rs2331704	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2525507	1.00[JPT][hapmap]
rs2753403	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs2842320	1.00[JPT][hapmap]
rs3784118	1.00[JPT][hapmap]
rs3966077	1.00[JPT][hapmap]
rs4899241	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4899243	1.00[JPT][hapmap]
rs4902578	1.00[JPT][hapmap]
rs4902580	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902581	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902582	0.85[ASN][1000 genomes]
rs4902587	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs4902588	1.00[JPT][hapmap];0.83[YRI][hapmap];0.85[ASN][1000 genomes]
rs4902589	1.00[JPT][hapmap];0.83[YRI][hapmap];0.85[ASN][1000 genomes]
rs7145422	1.00[JPT][hapmap]
rs7154175	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8003606	1.00[CHB][hapmap]
rs8013184	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs8019592	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9323510	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9743896	0.85[ASN][1000 genomes]
rs975422	1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ZFP36L1	Distal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)