SNP Report
Basic Infomation
| Name | rs11158742 dbSNP |
|---|---|
| Location | chr:14,68904149 |
| Allele | A/T |
LD-proxy of rSNPs(r2>0.8) (count: 27)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11158737 | 1.00[JPT][hapmap] |
| rs12435006 | 1.00[JPT][hapmap] |
| rs12588330 | 1.00[JPT][hapmap] |
| rs12590319 | 0.81[ASN][1000 genomes] |
| rs12897307 | 1.00[CHB][hapmap];1.00[JPT][hapmap] |
| rs17755674 | 1.00[JPT][hapmap] |
| rs1956538 | 1.00[JPT][hapmap] |
| rs2064910 | 1.00[JPT][hapmap] |
| rs2331704 | 1.00[JPT][hapmap] |
| rs2525507 | 1.00[JPT][hapmap] |
| rs2753403 | 1.00[JPT][hapmap] |
| rs2842320 | 1.00[JPT][hapmap] |
| rs3784118 | 1.00[JPT][hapmap] |
| rs3966077 | 1.00[JPT][hapmap] |
| rs4899241 | 1.00[JPT][hapmap] |
| rs4899243 | 1.00[JPT][hapmap] |
| rs4902578 | 1.00[JPT][hapmap] |
| rs4902580 | 1.00[JPT][hapmap] |
| rs4902581 | 1.00[JPT][hapmap] |
| rs4902587 | 1.00[JPT][hapmap] |
| rs4902588 | 1.00[JPT][hapmap] |
| rs4902589 | 1.00[JPT][hapmap] |
| rs7145422 | 1.00[JPT][hapmap] |
| rs7152152 | 0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs8019592 | 1.00[JPT][hapmap] |
| rs9323510 | 1.00[JPT][hapmap] |
| rs975422 | 1.00[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014