SNP Report
Name | rs2277283   dbSNP |
---|---|
Location | chr:11,61908440 |
Allele | T/A/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1047739 | 0.97[ASN][1000 genomes] |
rs11230910 | 0.89[JPT][hapmap] |
rs11230914 | 0.86[JPT][hapmap] |
rs11230917 | 0.89[JPT][hapmap] |
rs11230928 | 0.82[CHB][hapmap];0.81[JPT][hapmap];0.91[YRI][hapmap] |
rs11230935 | 0.81[JPT][hapmap];0.86[YRI][hapmap] |
rs11602735 | 0.89[JPT][hapmap] |
rs11603737 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
rs11606620 | 0.86[JPT][hapmap] |
rs1675061 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
rs1675062 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
rs1675063 | 0.81[JPT][hapmap] |
rs1675108 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
rs1675128 | 0.89[JPT][hapmap] |
rs1675129 | 0.89[JPT][hapmap] |
rs1675131 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
rs1675133 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
rs1792936 | 0.81[JPT][hapmap] |
rs1792942 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
rs1792944 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
rs1792946 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
rs1792948 | 0.82[CHB][hapmap];1.00[JPT][hapmap] |
rs1792949 | 0.89[JPT][hapmap] |
rs2511347 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
rs3825035 | 0.95[ASN][1000 genomes] |
rs3862389 | 0.89[JPT][hapmap] |
rs3867137 | 0.89[JPT][hapmap] |
rs3867138 | 0.97[ASN][1000 genomes] |
rs3890102 | 1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[ASN][1000 genomes] |
rs4144906 | 0.89[JPT][hapmap] |
rs4963289 | 0.95[ASN][1000 genomes] |
rs4963459 | 0.89[JPT][hapmap] |
rs4963460 | 0.89[JPT][hapmap] |
rs4963462 | 0.89[JPT][hapmap] |
rs4963471 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes] |
rs61893702 | 0.92[ASN][1000 genomes] |
rs7102807 | 0.89[JPT][hapmap] |
rs7122395 | 0.89[JPT][hapmap] |
rs7129085 | 0.82[CHB][hapmap];0.81[JPT][hapmap];0.91[YRI][hapmap] |
rs7924786 | 0.86[JPT][hapmap] |
rs7924923 | 0.89[JPT][hapmap] |
rs7928360 | 0.82[CHB][hapmap];0.81[JPT][hapmap];0.93[YRI][hapmap] |
rs7930687 | 0.89[JPT][hapmap] |
rs7935766 | 0.89[JPT][hapmap] |
rs922138 | 0.82[CHB][hapmap];0.81[JPT][hapmap] |
Symbol | Regulation type |
---|---|
INCENP | Distal transcriptional regulation |
MIR611 | Distal transcriptional regulation |
TMEM258 | Distal transcriptional regulation |
FEN1 | Distal transcriptional regulation |
FADS2 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014