SNP Report

Basic Infomation

Name	rs2051322 dbSNP
Location	chr:18,67550586
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 18)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10513983	0.93[CHB][hapmap];0.87[CHD][hapmap];0.84[ASN][1000 genomes]
rs1619767	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17081797	0.85[CEU][hapmap]
rs1788095	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1788112	0.86[CHB][hapmap]
rs1788113	0.81[CHB][hapmap]
rs1788235	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1788236	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1788237	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1788242	1.00[CEU][hapmap];0.84[GIH][hapmap];0.94[MEX][hapmap];0.95[TSI][hapmap];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1788243	1.00[CEU][hapmap];0.93[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.95[TSI][hapmap];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1790599	1.00[CEU][hapmap];0.84[GIH][hapmap];0.88[MEX][hapmap];0.95[TSI][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1790967	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1790971	1.00[CEU][hapmap];0.84[GIH][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2051323	0.83[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.94[MEX][hapmap];0.84[TSI][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2051324	0.89[ASW][hapmap];0.84[GIH][hapmap];0.89[LWK][hapmap];0.94[MEX][hapmap];0.84[TSI][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs2156247	0.93[CHB][hapmap];0.85[ASN][1000 genomes]
rs999146	0.95[GIH][hapmap];0.88[MEX][hapmap];0.84[TSI][hapmap];0.84[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CD226	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)