SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1619767	0.94[AMR][1000 genomes]
rs1788235	0.88[AMR][1000 genomes]
rs1788236	0.90[AMR][1000 genomes]
rs1788237	0.94[AMR][1000 genomes]
rs1788242	0.89[AFR][1000 genomes];0.95[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1788243	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1790599	0.94[AMR][1000 genomes]
rs1790967	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1790971	0.94[AMR][1000 genomes]
rs2051322	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2051323	0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs2051324	0.86[AMR][1000 genomes]
rs999146	0.81[AFR][1000 genomes];0.84[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CD226	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)