SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1619767	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1788095	0.88[AMR][1000 genomes]
rs1788114	0.83[ASN][1000 genomes]
rs1788236	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1788237	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1788238	0.95[ASN][1000 genomes]
rs1788242	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1788243	0.82[AMR][1000 genomes]
rs1790599	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1790967	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1790971	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2051322	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs999146	0.84[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CD226	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)