SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1007822	0.89[CEU][hapmap];0.93[TSI][hapmap]
rs11151544	0.82[CEU][hapmap]
rs12969613	0.89[CEU][hapmap]
rs1469858	0.82[CHB][hapmap]
rs1550134	0.90[YRI][hapmap]
rs1620963	0.88[YRI][hapmap]
rs1627417	0.90[YRI][hapmap]
rs1788235	0.83[ASN][1000 genomes]
rs1788236	0.84[ASN][1000 genomes]
rs1788238	0.94[CHB][hapmap];0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs1790597	0.95[YRI][hapmap]
rs4094864	0.82[CEU][hapmap]
rs763362	0.82[CHB][hapmap]

rSNP related genes

Symbol	Regulation type
CD226	Proximal transcriptional regulation
CD226	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)