SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1619767	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1788095	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1788235	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1788236	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1788237	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1788242	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1788243	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1790599	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1790971	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2051322	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2051323	0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs2051324	0.83[AMR][1000 genomes]
rs999146	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
CD226	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)