SNP Report

Basic Infomation

Name	rs17104681 dbSNP
Location	chr:14,68260864
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 127)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10130919	0.88[CHD][hapmap]
rs10131048	0.88[CHD][hapmap]
rs10132828	1.00[CEU][hapmap]
rs10133485	1.00[CEU][hapmap]
rs10133652	1.00[CEU][hapmap]
rs10134988	0.96[ASN][1000 genomes]
rs10135316	1.00[CEU][hapmap]
rs10135925	1.00[CEU][hapmap]
rs10137712	1.00[CEU][hapmap]
rs10143219	1.00[CEU][hapmap]
rs10143895	1.00[CEU][hapmap]
rs10144128	1.00[CEU][hapmap]
rs10145884	1.00[CEU][hapmap]
rs10146719	1.00[CEU][hapmap]
rs10146766	1.00[CEU][hapmap]
rs10146831	1.00[CEU][hapmap]
rs10147569	1.00[CEU][hapmap]
rs10148893	1.00[CEU][hapmap]
rs1015023	0.88[CHD][hapmap]
rs10151123	1.00[CEU][hapmap]
rs10151317	1.00[CEU][hapmap]
rs10450891	1.00[CEU][hapmap]
rs11158693	0.88[CHD][hapmap]
rs11158710	1.00[CEU][hapmap]
rs1118397	1.00[CEU][hapmap]
rs11624166	0.88[CHD][hapmap]
rs11625742	1.00[CEU][hapmap]
rs11626594	0.88[CHD][hapmap]
rs12886915	0.88[CHD][hapmap]
rs12896666	0.87[CHD][hapmap]
rs17104663	0.92[ASN][1000 genomes]
rs17104689	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104700	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104774	1.00[CEU][hapmap]
rs17104783	1.00[CEU][hapmap]
rs17104786	1.00[CEU][hapmap]
rs17104793	1.00[CEU][hapmap]
rs17104796	1.00[CEU][hapmap]
rs17104799	1.00[CEU][hapmap]
rs17104823	1.00[CEU][hapmap]
rs17104824	1.00[CEU][hapmap]
rs17104827	1.00[CEU][hapmap]
rs17104829	1.00[CEU][hapmap]
rs17783124	0.88[CHD][hapmap]
rs17783202	1.00[CEU][hapmap]
rs1812250	0.82[EUR][1000 genomes]
rs181563	0.88[CHD][hapmap]
rs1950766	1.00[CEU][hapmap]
rs1950769	0.88[CHD][hapmap]
rs1955469	1.00[CEU][hapmap];0.85[GIH][hapmap];0.82[EUR][1000 genomes]
rs2180537	1.00[CEU][hapmap]
rs28396172	0.96[ASN][1000 genomes]
rs28473357	0.96[ASN][1000 genomes]
rs28697984	0.85[ASN][1000 genomes]
rs2874131	0.88[CHD][hapmap]
rs28751961	0.96[ASN][1000 genomes]
rs28833913	0.85[ASN][1000 genomes]
rs28835585	0.92[ASN][1000 genomes]
rs28847917	0.92[ASN][1000 genomes]
rs34663731	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34768780	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34787467	0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs34935709	1.00[EUR][1000 genomes]
rs35588855	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35608268	0.82[EUR][1000 genomes]
rs35927243	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3742882	1.00[CEU][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs3742883	1.00[CEU][hapmap];0.85[GIH][hapmap];0.82[EUR][1000 genomes]
rs3742884	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs3742885	1.00[CEU][hapmap];1.00[GIH][hapmap]
rs4899228	0.92[ASN][1000 genomes]
rs4899229	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs4902517	0.88[CHD][hapmap]
rs4902523	1.00[CEU][hapmap];1.00[GIH][hapmap]
rs4902525	0.96[ASN][1000 genomes]
rs4902529	0.92[ASN][1000 genomes]
rs4902530	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs4902531	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs4902532	0.83[ASN][1000 genomes]
rs58159602	0.92[ASN][1000 genomes]
rs6573802	1.00[CEU][hapmap]
rs7141203	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7143377	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7143521	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7147296	1.00[CEU][hapmap]
rs7149122	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7149351	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7149356	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7149360	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7149460	1.00[CEU][hapmap]
rs7149796	1.00[CEU][hapmap]
rs7150467	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7150860	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs7151091	0.88[CHD][hapmap]
rs7152445	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7152727	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7154725	1.00[CEU][hapmap]
rs7156492	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs7157550	1.00[CEU][hapmap]
rs7157720	1.00[CEU][hapmap]
rs7159786	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs742867	0.85[GIH][hapmap];1.00[JPT][hapmap]
rs767972	0.88[CHD][hapmap]
rs8003431	0.88[CHD][hapmap]
rs8006175	1.00[CEU][hapmap]
rs8007989	1.00[CEU][hapmap]
rs8008791	1.00[CEU][hapmap]
rs8012665	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs8015520	0.96[ASN][1000 genomes]
rs8015595	1.00[CEU][hapmap]
rs8015741	1.00[CEU][hapmap]
rs8016246	0.96[ASN][1000 genomes]
rs8017013	0.88[CHD][hapmap]
rs8017718	0.92[ASN][1000 genomes]
rs8017930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs8018883	0.92[ASN][1000 genomes]
rs8019420	0.92[ASN][1000 genomes]
rs8020512	1.00[CEU][hapmap]
rs932474	0.82[EUR][1000 genomes]
rs932475	1.00[CEU][hapmap];0.85[GIH][hapmap];0.82[EUR][1000 genomes]
rs932554	0.88[CHD][hapmap]
rs961700	0.88[CHD][hapmap]
rs9652362	1.00[CEU][hapmap]
rs9652363	1.00[CEU][hapmap]
rs9652364	1.00[CEU][hapmap]
rs9788517	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9796374	1.00[CEU][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000258759	Proximal transcriptional regulation
ZFYVE26	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)