SNP Report

Basic Infomation

Name	rs3742882 dbSNP
Location	chr:14,68227897
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 77)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10133485	1.00[CEU][hapmap]
rs10133652	1.00[CEU][hapmap]
rs10135925	1.00[CEU][hapmap]
rs10137712	1.00[CEU][hapmap]
rs10145884	1.00[CEU][hapmap]
rs10146766	1.00[CEU][hapmap]
rs10146831	1.00[CEU][hapmap]
rs10148893	1.00[CEU][hapmap]
rs10450891	1.00[CEU][hapmap]
rs1118397	1.00[CEU][hapmap]
rs11623700	0.81[MEX][hapmap]
rs11623785	0.89[YRI][hapmap]
rs11623961	0.85[YRI][hapmap]
rs11625742	1.00[CEU][hapmap]
rs12050393	0.81[MEX][hapmap]
rs1555193	0.81[MEX][hapmap];0.89[YRI][hapmap]
rs17104681	1.00[CEU][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs17104689	1.00[CEU][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs17104700	1.00[CEU][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs17104774	1.00[CEU][hapmap]
rs17104783	1.00[CEU][hapmap]
rs17104786	1.00[CEU][hapmap]
rs17104793	1.00[CEU][hapmap]
rs17104796	1.00[CEU][hapmap]
rs17104799	1.00[CEU][hapmap]
rs17783202	1.00[CEU][hapmap]
rs1812250	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1955469	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1961561	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2180537	1.00[CEU][hapmap]
rs2320029	0.81[MEX][hapmap];0.89[YRI][hapmap]
rs34663731	0.82[EUR][1000 genomes]
rs34768780	0.82[EUR][1000 genomes]
rs34935709	0.82[EUR][1000 genomes]
rs35588855	0.82[EUR][1000 genomes]
rs35927243	0.82[EUR][1000 genomes]
rs3742880	0.81[MEX][hapmap]
rs3742883	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3742884	0.85[GIH][hapmap];1.00[JPT][hapmap]
rs3742885	1.00[CEU][hapmap];0.85[GIH][hapmap]
rs4899222	0.81[MEX][hapmap];0.89[YRI][hapmap]
rs4899229	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs4902523	1.00[CEU][hapmap];0.85[GIH][hapmap]
rs4902530	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs4902531	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs6573790	0.85[LWK][hapmap];0.81[MEX][hapmap];0.88[YRI][hapmap]
rs6573802	1.00[CEU][hapmap]
rs7141203	1.00[CEU][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs7143377	0.82[EUR][1000 genomes]
rs7143521	1.00[CEU][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs7147296	1.00[CEU][hapmap]
rs7149351	0.82[EUR][1000 genomes]
rs7149356	0.82[EUR][1000 genomes]
rs7149460	1.00[CEU][hapmap]
rs7149796	1.00[CEU][hapmap]
rs7150860	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs7156492	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs7157720	1.00[CEU][hapmap]
rs7159786	0.82[EUR][1000 genomes]
rs742867	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs761513	0.81[MEX][hapmap]
rs8006175	1.00[CEU][hapmap]
rs8007989	1.00[CEU][hapmap]
rs8008791	1.00[CEU][hapmap]
rs8012665	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs8013767	0.81[MEX][hapmap]
rs8015595	1.00[CEU][hapmap]
rs8015741	1.00[CEU][hapmap]
rs8017930	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs8020512	1.00[CEU][hapmap]
rs932474	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs932475	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9652362	1.00[CEU][hapmap]
rs9652363	1.00[CEU][hapmap]
rs9652364	1.00[CEU][hapmap]
rs9788517	1.00[CEU][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs9796374	1.00[CEU][hapmap]

rSNP related genes

Symbol	Regulation type
ZFYVE26	Proximal transcriptional regulation
ZFYVE26	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)