SNP Report
Basic Infomation
| Name | rs932474 dbSNP |
|---|---|
| Location | chr:14,68236672 |
| Allele | G/A |
LD-proxy of rSNPs(r2>0.8) (count: 23)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11625742 | 0.87[AMR][1000 genomes];0.97[ASN][1000 genomes] |
| rs17104681 | 0.82[EUR][1000 genomes] |
| rs17104689 | 0.82[EUR][1000 genomes] |
| rs17104700 | 0.82[EUR][1000 genomes] |
| rs1812250 | 0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1955469 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs34663731 | 0.82[EUR][1000 genomes] |
| rs34768780 | 0.82[EUR][1000 genomes] |
| rs34935709 | 0.82[EUR][1000 genomes] |
| rs35588855 | 0.82[EUR][1000 genomes] |
| rs35927243 | 0.82[EUR][1000 genomes] |
| rs3742882 | 0.86[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs3742883 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes] |
| rs56082285 | 0.93[ASN][1000 genomes] |
| rs7141203 | 0.82[EUR][1000 genomes] |
| rs7143377 | 0.82[EUR][1000 genomes] |
| rs7143521 | 0.82[EUR][1000 genomes] |
| rs7149351 | 0.82[EUR][1000 genomes] |
| rs7149356 | 0.82[EUR][1000 genomes] |
| rs7158363 | 0.80[AMR][1000 genomes];0.97[ASN][1000 genomes] |
| rs7159786 | 0.82[EUR][1000 genomes] |
| rs932475 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9788517 | 0.82[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ZFYVE26 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014