SNP Report
Basic Infomation
| Name | rs7143377 dbSNP |
|---|---|
| Location | chr:14,68266157 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 54)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10134988 | 0.96[ASN][1000 genomes] |
| rs17104663 | 0.92[ASN][1000 genomes] |
| rs17104681 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17104689 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs17104700 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs1812250 | 0.82[EUR][1000 genomes] |
| rs1955469 | 0.82[EUR][1000 genomes] |
| rs28396172 | 0.96[ASN][1000 genomes] |
| rs28473357 | 0.96[ASN][1000 genomes] |
| rs28697984 | 0.85[ASN][1000 genomes] |
| rs28751961 | 0.96[ASN][1000 genomes] |
| rs28833913 | 0.85[ASN][1000 genomes] |
| rs28835585 | 0.92[ASN][1000 genomes] |
| rs28847917 | 0.92[ASN][1000 genomes] |
| rs34663731 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs34768780 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs34787467 | 1.00[ASN][1000 genomes] |
| rs34935709 | 1.00[EUR][1000 genomes] |
| rs35588855 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs35608268 | 0.82[EUR][1000 genomes] |
| rs35927243 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs3742882 | 0.82[EUR][1000 genomes] |
| rs3742883 | 0.82[EUR][1000 genomes] |
| rs3742884 | 0.92[ASN][1000 genomes] |
| rs4899228 | 0.92[ASN][1000 genomes] |
| rs4899229 | 0.92[ASN][1000 genomes] |
| rs4902525 | 0.96[ASN][1000 genomes] |
| rs4902529 | 0.92[ASN][1000 genomes] |
| rs4902530 | 0.92[ASN][1000 genomes] |
| rs4902531 | 0.92[ASN][1000 genomes] |
| rs4902532 | 0.83[ASN][1000 genomes] |
| rs58159602 | 0.92[ASN][1000 genomes] |
| rs7141203 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7143521 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7149122 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7149351 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7149356 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7149360 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7150467 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7150860 | 0.96[ASN][1000 genomes] |
| rs7152445 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7152727 | 0.82[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7156492 | 0.92[ASN][1000 genomes] |
| rs7159786 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs8012665 | 0.92[ASN][1000 genomes] |
| rs8015520 | 0.96[ASN][1000 genomes] |
| rs8016246 | 0.96[ASN][1000 genomes] |
| rs8017718 | 0.92[ASN][1000 genomes] |
| rs8017930 | 0.92[ASN][1000 genomes] |
| rs8018883 | 0.92[ASN][1000 genomes] |
| rs8019420 | 0.92[ASN][1000 genomes] |
| rs932474 | 0.82[EUR][1000 genomes] |
| rs932475 | 0.82[EUR][1000 genomes] |
| rs9788517 | 1.00[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000258759 | RNA binding protein mediated regulation |
| ZFYVE26 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014