SNP Report

Basic Infomation

Name	rs28396172 dbSNP
Location	chr:14,68329424
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 132)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10130605	0.85[EUR][1000 genomes]
rs10130837	0.85[EUR][1000 genomes]
rs10131022	0.99[AFR][1000 genomes]
rs10133485	0.85[EUR][1000 genomes]
rs10133652	0.85[EUR][1000 genomes]
rs10134763	0.93[AFR][1000 genomes]
rs10134988	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10135925	0.85[EUR][1000 genomes]
rs10137712	0.85[EUR][1000 genomes]
rs10142186	0.96[AFR][1000 genomes]
rs10142687	0.92[EUR][1000 genomes]
rs10142929	0.92[EUR][1000 genomes]
rs10145884	0.85[EUR][1000 genomes]
rs10146766	0.85[EUR][1000 genomes]
rs10146831	0.85[EUR][1000 genomes]
rs10147052	0.99[AFR][1000 genomes]
rs10148893	0.85[EUR][1000 genomes]
rs10150330	0.85[EUR][1000 genomes]
rs10450891	0.85[EUR][1000 genomes]
rs10467819	0.85[EUR][1000 genomes]
rs1073025	0.85[EUR][1000 genomes]
rs1073026	0.85[EUR][1000 genomes]
rs1118397	0.85[EUR][1000 genomes]
rs17104663	0.89[ASN][1000 genomes]
rs17104681	0.96[ASN][1000 genomes]
rs17104689	0.96[ASN][1000 genomes]
rs17104697	0.87[AFR][1000 genomes]
rs17104700	0.96[ASN][1000 genomes]
rs17104758	0.85[EUR][1000 genomes]
rs17104774	0.85[EUR][1000 genomes]
rs17104783	0.85[EUR][1000 genomes]
rs17104786	0.85[EUR][1000 genomes]
rs17104793	0.85[EUR][1000 genomes]
rs17104796	0.85[EUR][1000 genomes]
rs17104799	0.85[EUR][1000 genomes]
rs17783202	0.85[EUR][1000 genomes]
rs2180537	0.85[EUR][1000 genomes]
rs28405326	0.85[EUR][1000 genomes]
rs28408783	0.85[EUR][1000 genomes]
rs28434770	0.85[EUR][1000 genomes]
rs28444090	0.85[EUR][1000 genomes]
rs28451245	0.90[AFR][1000 genomes]
rs28473357	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28479359	0.81[AFR][1000 genomes]
rs28516665	0.85[EUR][1000 genomes]
rs28697984	0.89[ASN][1000 genomes]
rs28701947	0.85[EUR][1000 genomes]
rs28751961	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28757308	0.85[EUR][1000 genomes]
rs28816808	0.85[EUR][1000 genomes]
rs28833913	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28835585	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28847917	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs28896907	0.85[EUR][1000 genomes]
rs34057001	0.99[AFR][1000 genomes]
rs34663731	0.96[ASN][1000 genomes]
rs34700596	0.85[EUR][1000 genomes]
rs34768780	0.96[ASN][1000 genomes]
rs34787467	0.96[ASN][1000 genomes]
rs35010674	0.99[AFR][1000 genomes]
rs35588855	0.96[ASN][1000 genomes]
rs35608268	0.84[EUR][1000 genomes]
rs35927243	0.96[ASN][1000 genomes]
rs3742884	0.89[ASN][1000 genomes]
rs4272963	0.96[AFR][1000 genomes]
rs4899226	0.92[EUR][1000 genomes]
rs4899228	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4899229	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4902522	0.96[AFR][1000 genomes]
rs4902523	0.92[EUR][1000 genomes]
rs4902525	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs4902529	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4902530	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4902531	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4902532	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4902534	0.85[EUR][1000 genomes]
rs4902537	0.85[EUR][1000 genomes]
rs57348219	0.90[AFR][1000 genomes]
rs58112975	0.96[AFR][1000 genomes]
rs58159602	0.89[ASN][1000 genomes]
rs60014063	0.85[EUR][1000 genomes]
rs6573802	0.85[EUR][1000 genomes]
rs7140987	0.85[EUR][1000 genomes]
rs7141203	0.96[ASN][1000 genomes]
rs7143377	0.96[ASN][1000 genomes]
rs7143483	0.96[AFR][1000 genomes]
rs7143521	0.96[ASN][1000 genomes]
rs7145385	0.99[AFR][1000 genomes]
rs7147296	0.85[EUR][1000 genomes]
rs7149122	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7149351	0.96[ASN][1000 genomes]
rs7149356	0.96[ASN][1000 genomes]
rs7149360	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7149460	0.85[EUR][1000 genomes]
rs7149669	0.87[AFR][1000 genomes]
rs7149796	0.92[EUR][1000 genomes]
rs7150467	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7150860	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7151035	0.92[EUR][1000 genomes]
rs7152445	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7152727	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7153470	0.85[EUR][1000 genomes]
rs7156492	0.89[ASN][1000 genomes]
rs7157699	0.93[AFR][1000 genomes]
rs7159786	0.96[ASN][1000 genomes]
rs8003181	0.85[EUR][1000 genomes]
rs8005494	0.96[AFR][1000 genomes]
rs8006175	0.85[EUR][1000 genomes]
rs8007989	0.92[EUR][1000 genomes]
rs8008791	0.85[EUR][1000 genomes]
rs8009762	0.90[AFR][1000 genomes]
rs8010136	0.99[AFR][1000 genomes]
rs8012665	0.89[ASN][1000 genomes]
rs8014844	0.85[EUR][1000 genomes]
rs8015427	0.99[AFR][1000 genomes]
rs8015520	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8015595	0.92[EUR][1000 genomes]
rs8015609	0.99[AFR][1000 genomes]
rs8015741	0.85[EUR][1000 genomes]
rs8016246	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8016563	0.85[EUR][1000 genomes]
rs8017718	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8017930	0.81[AFR][1000 genomes];0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8018161	0.99[AFR][1000 genomes]
rs8018528	0.99[AFR][1000 genomes]
rs8018883	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8019420	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs8020512	0.85[EUR][1000 genomes]
rs8023116	0.99[AFR][1000 genomes]
rs9652362	0.85[EUR][1000 genomes]
rs9652364	0.85[EUR][1000 genomes]
rs9796374	0.85[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RAD51B	Proximal transcriptional regulation
RAD51B	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)