SNP Report
Basic Infomation
| Name | rs8005494 dbSNP |
|---|---|
| Location | chr:14,68315013 |
| Allele | C/T |
LD-proxy of rSNPs(r2>0.8) (count: 33)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10131022 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs10134763 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs10134988 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs10139482 | 0.92[ASN][1000 genomes] |
| rs10142186 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs10147052 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs17104697 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs17515456 | 1.00[ASN][1000 genomes] |
| rs2295109 | 0.92[ASN][1000 genomes] |
| rs2295110 | 0.92[ASN][1000 genomes] |
| rs28396172 | 0.96[AFR][1000 genomes] |
| rs28451245 | 0.86[AFR][1000 genomes] |
| rs28451605 | 0.95[ASN][1000 genomes] |
| rs34057001 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs34706521 | 1.00[ASN][1000 genomes] |
| rs35010674 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs4272963 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs4902522 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs4902525 | 0.80[AFR][1000 genomes] |
| rs57348219 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs58112975 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7143483 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7144698 | 0.92[ASN][1000 genomes] |
| rs7145385 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7149669 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7157699 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs8009762 | 0.89[AFR][1000 genomes] |
| rs8010136 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs8015427 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs8015609 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs8018161 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs8018528 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes] |
| rs8023116 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| RAD51B | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014