SNP Report
Name | rs12480008   dbSNP |
---|---|
Location | chr:20,44676777 |
Allele | G/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs11696784 | 1.00[AFR][1000 genomes] |
rs11696804 | 1.00[CHB][hapmap] |
rs12479764 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs12479993 | 1.00[AFR][1000 genomes] |
rs12480045 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs12480597 | 1.00[AFR][1000 genomes] |
rs12480744 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs12480874 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs12480942 | 0.81[EUR][1000 genomes] |
rs12481093 | 1.00[AFR][1000 genomes];0.82[AMR][1000 genomes] |
rs12481120 | 1.00[AFR][1000 genomes] |
rs12481488 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs13040272 | 1.00[CHB][hapmap] |
rs16985435 | 1.00[CEU][hapmap];1.00[CHB][hapmap] |
rs16991024 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs16991026 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs16991062 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs16991072 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs1805088 | 1.00[CHB][hapmap];1.00[AFR][1000 genomes] |
rs2868365 | 1.00[AFR][1000 genomes] |
rs35300540 | 1.00[AFR][1000 genomes] |
rs35804246 | 1.00[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs3746514 | 1.00[AFR][1000 genomes] |
rs3746516 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs3746517 | 1.00[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs3746518 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs3746519 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs3746520 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs3848723 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes] |
rs3848724 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes] |
rs3901163 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs3918273 | 1.00[AFR][1000 genomes] |
rs3918274 | 1.00[AFR][1000 genomes] |
rs3933239 | 1.00[CHB][hapmap] |
rs4810483 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes] |
rs4812984 | 1.00[AFR][1000 genomes] |
rs4812985 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.81[EUR][1000 genomes] |
rs4812986 | 1.00[CEU][hapmap] |
rs4812987 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[EUR][1000 genomes] |
rs4812989 | 1.00[AFR][1000 genomes];0.88[AMR][1000 genomes] |
rs57489591 | 1.00[AFR][1000 genomes] |
rs59253654 | 1.00[AFR][1000 genomes] |
rs6032636 | 1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs60551459 | 1.00[AFR][1000 genomes] |
rs61088297 | 1.00[AFR][1000 genomes] |
rs8113877 | 1.00[CHB][hapmap] |
rs8114050 | 1.00[CHB][hapmap] |
rs8123862 | 1.00[CHB][hapmap] |
Symbol | Regulation type |
---|---|
SLC12A5 | RNA binding protein mediated regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014